Open boundary conditions in stochastic transport processes with pair-factorized steady states

Using numerical methods we discuss the effects of open boundary conditions on condensation phenomena in the zero-range process (ZRP) and transport processes with pair-factorized steady states (PFSS), an extended model of the ZRP with nearest-neighbor interaction. For the zero-range process we compare to analytical results in the literature with respect to criticality and condensation. For the extended model we find a similar phase structure, but observe supercritical phases with droplet formation for strong boundary drives.Comment: conference contribution for the 27th Annual CSP Workshop on "Recent Developments in Computer Simulation Studies in Condensed Matter Physics", CSP 2014 5 pages, 5 figure

Order-by-disorder in classical oscillator systems

We consider classical nonlinear oscillators on hexagonal lattices. When the coupling between the elements is repulsive, we observe coexisting states, each one with its own basin of attraction. These states differ by their degree of synchronization and by patterns of phase-locked motion. When disorder is introduced into the system by additive or multiplicative Gaussian noise, we observe a non-monotonic dependence of the degree of order in the system as a function of the noise intensity: intervals of noise intensity with low synchronization between the oscillators alternate with intervals where more oscillators are synchronized. In the latter case, noise induces a higher degree of order in the sense of a larger number of nearly coinciding phases. This order-by-disorder effect is reminiscent to the analogous phenomenon known from spin systems. Surprisingly, this non-monotonic evolution of the degree of order is found not only for a single interval of intermediate noise strength, but repeatedly as a function of increasing noise intensity. We observe noise-driven migration of oscillator phases in a rough potential landscape.Comment: 12 pages, 13 figures; comments are welcom

Stochastic Description of a Bistable Frustrated Unit

Mixed positive and negative feedback loops are often found in biological systems which support oscillations. In this work we consider a prototype of such systems, which has been recently found at the core of many genetic circuits showing oscillatory behaviour. Our model consists of two interacting species A and B, where A activates not only its own production, but also that of its repressor B. While the self-activation of A leads already to a bistable unit, the coupling with a negative feedback loop via B makes the unit frustrated. In the deterministic limit of infinitely many molecules, such a bistable frustrated unit is known to show excitable and oscillatory dynamics, depending on the maximum production rate of A which acts as a control parameter. We study this model in its fully stochastic version and we find oscillations even for parameters which in the deterministic limit are deeply in the fixed-point regime. The deeper we go into this regime, the more irregular these oscillations are, becoming finally random excitations whenever fluctuations allow the system to overcome the barrier for a large excursion in phase space. The fluctuations can no longer be fully treated as a perturbation. The smaller the system size (the number of molecules), the more frequent are these excitations. Therefore, stochasticity caused by demographic noise makes this unit even more flexible with respect to its oscillatory behaviour.Comment: 28 pages, 17 figure